
This company has spent a decade innovating NGS-based companion diagnostics worldwide–what’s next?
Remarkable advances in precision oncology have reshaped cancer treatment, offering life-changing therapies to patients with limited options. These advances require powerful technologies that generate biological data, translate complex biomarker data, and integrate easily with clinical care—ultimately helping improve outcomes for patients across a wide range of tumor types. Few technologies have shaped the progress in precision oncology as significantly as next-generation sequencing (NGS), which has transformed biomarker testing from single-gene tests into broad genomic profiling that can simultaneously assess hundreds of biomarkers, enabling more precise and personalized treatment strategies across a broad range of cancers.
Over the past decade, Thermo Fisher Scientific has helped shape the role of NGS in oncology, by collaborating with pharma companies, clinicians, and regulatory agencies to develop scalable testing solutions that help expand access to precision medicine for more patients.
A decade of innovations and impact
Overcoming obstacles to enable precision medicine
The impact of NGS on precision medicine stems not only from scientific innovation, but from advancing technologies that help overcome real-world barriers. While scientific breakthroughs with NGS enables deep genomic insights, its true transformative power lies in the practical application that have made this technology accessible, scalable, and clinically actionable.
Rather than focusing solely on discovery, technologies that make sequencing faster, more affordable, and more accessible across diverse healthcare settings are crucial. They better enable clinicians to tailor care to individual patients—no matter where they are.

All of the news, delivered with full-text to your inbox. For professionals discovering, developing, and marketing biopharmaceutical drugs.
This shift is critical. One of the persistent challenges in CDx development is limited tissue availability during clinical trials. Decentralized NGS solutions can preserve valuable samples by enable local testing, reducing turnaround times, and mitigating sample loss. Additionally, optimizing sample preparation chemistry allow for robust performance, even with low nucleic acid input, meaning more patients can be tested—broadening eligibility and reducing barriers to access.
A pivotal moment came with the launch of the Ion Torrent™ Oncomine™ Dx Target Test—the first FDA-approved distributable NGS-based CDx test1. Since 2017, the test has expanded its indications for additional biomarkers and therapies, and is now reimbursed in 19 countries, reaching over 550 million lives globally2.
By combining advances in NGS technology with close collaborations with pharmaceutical developers and regulatory agencies, precision oncology is becoming more scalable and accessible than ever before.
Partnerships power progress
The evolution of precision oncology is not driven by technology alone—it’s the result of strategic, sustained collaborations across the healthcare ecosystem. Collaborations with regulatory agencies and partnerships with pharmaceutical innovators are essential to advancing companion diagnostics and bringing targeted therapies to market efficient and globally.
With 14 active pharma collaborations, today’s efforts build on years of co-development experience, from early trial integration to global regulatory approvals and commercialization2. These collaborations are evidence of a model that works: one that aligns diagnostic development with therapeutic innovation to accelerate timelines, improve efficiency, and ultimately bring therapies to patients.
It’s this coordinated approach that helps ensure innovations in genomics translate into real-world solutions—transforming how cancer is diagnosed, treated, and managed worldwide.
The next decade: bringing precision oncology closer to patients
This reflects more than a technological milestone—it represents the culmination of over a decade of focused innovation in NGS-based CDx. What began as an effort to develop a CDx for non-small cell lung cancer (NSCLC), has matured into a globally scalable model across multiple cancer types3.
By uniting genomic innovation with scalable infrastructure, precision oncology is being reimagined—expanding its reach across clinical settings and geographies. The introduction of decentralized solutions like the Ion Torrent™ Oncomine™ Dx Express Test, built on the Ion Torrent™ Genexus Dx System, marks a new era. With end-to-end automation and the ability to deliver clinically relevant NGS results in as little as 24 hours from tissue or liquid biopsy, the barriers between testing and treatment decision making are being further reduced.
These advancements signal what the next decade holds: faster, more efficient diagnostics that integrate into routine care—bringing testing closer to patients and enabling more timely, personalized treatment decisions. What once represented cutting-edge innovation is now becoming part of routine care. With a decade of progress as the foundation, the path forward is clear: expanding global access to precision oncology by delivering faster, more personalized insights that empower physicians and help improve outcomes for patients.
References:
1. U.S. Food and Drug Administration. List of Cleared or Approved Companion Diagnostic Devices (In Vitro and Imaging Tools). Accessed May 28, 2025. https://www.fda.gov/medical-devices/in-vitro-diagnostics/list-cleared-or-approved-companion-diagnostic-devices-in-vitro-and-imaging-tools.
2. Thermo Fisher Scientific, Companion Diagnostics. Accessed May 28, 2025. https://www.thermofisher.com/us/en/home/clinical/diagnostic-development/companion-diagnostics.html.
3. Pfizer Inc. Thermo Fisher Scientific Signs Development Agreement for Next-Generation Sequencing-Based Companion Diagnostic. Press release, November 18, 2015. Accessed May 28, 2025. https://www.pfizer.com/news/press-release/press-release-detail/thermo-fisher-scientific-signs-development-agreement-next
Oncomine Dx Target Test: For In Vitro Diagnostic Use. Oncomine Dx Express Test: For In Vitro Diagnostic Use. Not available in all countries, including the United States.
The Oncomine Dx Target Test is a qualitative in vitro diagnostic test that uses targeted high-throughput, parallel sequencing technology to detect single-nucleotide variants (SNVs), insertions, and deletions in 23 genes from DNA and fusions in ROS1 and RET from RNA isolated from formalin-fixed, paraffin-embedded (FFPE) tumor tissue samples from patients with non–small cell lung cancer (NSCLC), IDH1 R132 mutations from FFPE tumor tissue samples from patients with cholangiocarcinoma (CC) and RET SNVs, MNVs, and deletions from DNA isolated from FFPE tumor tissue samples from patients with medullary thyroid cancer (MTC), and RET fusions from RNA isolated from FFPE tumor tissue samples from patients with thyroid cancer (TC) using the Ion PGM Dx System.
The Oncomine Dx Express Test is a qualitative in vitro diagnostic test that uses targeted next-generation sequencing (NGS) technology and the Ion Torrent Genexus Dx System to detect deletions, insertions, substitutions, and copy number gain present in 42 genes and fusions in 18 genes from DNA and RNA extracted from formalin-fixed, paraffin-embedded (FFPE) tumor tissue samples. The Oncomine Dx Express Test also detects deletions, insertions and substitutions in 42 genes and fusions in 7 genes from cfTNA extracted from plasma samples. The Oncomine Dx Express Test is intended to provide clinically relevant tumor mutation profiling information to be used by qualified health care professionals in accordance with professional guidelines as an aid in therapy management of cancer patients with solid malignant neoplasms using FFPE samples and as an aid in therapy management of cancer patients with non-small cell lung cancer using plasma samples. It is not conclusive or prescriptive for labeled use of any specific therapeutic product.